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This course is an introduction to the Galaxy environment. Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience. |
Prerequisites
No experience required
Program
- Data upload, histories and data formats
- My first analyses with Galaxy
- My first workflow with Galaxy
- How to share my work
- Concrete application: from raw reads to SNPs
Learning objectives
- Familiarize yourself with the basics of Galaxy
- Learn how to run tools
- Learn how histories work
- Learn how to create a workflow
- Learn how to share your work
Instructors
- Alexis Dereeper (AD)
- Sebastien Ravel (SR)
- Christine Tranchant (CT)
- Aurore Comte (AC)
- Marilyne Summo (MS)
Trainings
| Date | Location | Topics | Participants | Instructors | Links | Units |
| 2019 | Montpellier, France | Workflow manager | 16 | AC, MS, SR | UMR DIADE, IMPE, MIVEGEC, AGAP, TransVIHMi | |
| 2018 | Montpellier, France | Workflow management systems | 16 | AD, CT, SR | UMR DIADE, IMPE, MIVEGEC, AGAP, TransVIHMi |