South Green Trainings pages

Advanced HPC Trainings

This course continues the explanation on how to work on HPC Southgreen clusters. It is intended for experienced users, with the goals of improving LC user productivity and minimizing the obstacles. New notions and tools are presented such as job arrays, basic softwares installation,module environment and singularity. All these notions will be developped.

Prerequisites

Linux Basics

HPC Trainings

Program

Install your own softwares
Launch job arrays with SLURM
Create your own module environments
Use a Singularity container
Install Singularity on your computer
Create your own Singularity container and use it on the cluster

Learning objectives

After this course, participants should be able to:

Install basic software
Launch job arrays
Create module environments
Create Singularity containers

Training material

Slides : see
Practice : see
Tutorials : see

Instructors

Ndomassi Tando (NT) - ndomassi.tando@ird.fr
Bertrand Pitollat (BP) - bertrand.pitollat@cirad.fr
Francois Sabot (FS) - francois.sabot@ird.fr
Valérie Noel (VN) - valerie.noel@ird.fr
Sebastien Ravel (SR) - sebastien.ravel@cirad.fr
Guilhem Sempere (GS) - guilhem.sempere@cirad.fr
Gaetan Droc (GD) - gaetan.droc@cirad.fr

Trainings

Date	Location	Topics	Participants	Instructors	Links	Units
2022	IRD Montpellier, France	Advanced HPC		Ndomassi Tando, Bertrand Pitollat, Guilhem Sempere, Gaetan Droc		UMR DIADE,INTERTRYP,AGAP
2019	IRD Montpellier, France	Advanced HPC		Ndomassi Tando, Bertrand Pitollat, Francois Sabot, Valérie Noel, Sebastien Ravel		UMR DIADE,MIVEGEC,AGAP,BGPI