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HPC TrainingsThis course offers an introduction on how to work with HPC Southgreen clusters. It is intended for new users, with the goals of improving LC user productivity and minimizing the obstacles. The HPC Southgreen cluster are presented, together with the tools to be able to use it. Module load notion, interactive usage and batch jobs submittions will be developped. |
Prerequisites
Linux Basics
Program
- Introduction to HPCs architecture
- Discover Sun grid Engine (SGE) Or Slurm
- Data Management on clusters
- Interactive Usage
- Submit batch jobs
Learning objectives
After this course, participants should be able to:- Use the HPC resources interactively
- Manage data copies
- Use module load
- submit batch jobs
Training material
- Slides in french : itrop-sge itrop-slurm
- Slides in french (short version) : itrop-sge itrop-slurm
- Slides in english: itrop-sge itrop-slurm
- Slides in english (short version) : itrop-sge itrop-slurm
- Practice : itrop-sge itrop-slurm
- HowTos : itrop-sge itrop-slurm
Instructors
- Ndomassi Tando (NT) - ndomassi.tando@ird.fr
- Bertrand Pitollat(BP) - bertrand.pitollat@cirad.fr
- Alexis Dereeper (AD) - alexis.dereeper@ird.fr
- Francois Sabot (SB) - francois.sabot@ird.fr
- Bruno Granouillac (BG) - bruno.granouillac@ird.fr
- Pierre Larmande (PL) - pierre.larmande@ird.fr
- Christine Tranchant (CT) - christine.tranchant@ird.fr
- Valérie Noel (VN) - valerie.noel@ird.fr
- Julie Orjuela (JO) - julie.orjela@ird.fr
- Aurore Comte (AC) - aurore.comte@ird.fr
- Gaetan Droc (GD) - gaetan.droc@cirad.fr
Trainings
| Date | Location | Topics | Participants | Instructors | Links | Units |
| Jul 2021 | IRD Montpellier, France | HPC Introduction | 2 | NT | UMR DIADE | |
| May 2021 | IRD Montpellier, France | HPC Introduction | 3 | NT | UMR DIADE | |
| Apr 2021 | IRD Montpellier, France | HPC Introduction | 3 | NT,VN | UMR DIADE, MIVEGEC | |
| Apr 2021 | IRD Montpellier, France | HPC Introduction | 1 | JO | UMR DIADE | |
| Mar 2021 | IRD Montpellier, France | HPC Introduction | 3 | NT,VN | UMR DIADE, MIVEGEC | |
| Mar 2021 | IRD Montpellier, France | HPC Introduction | 5 | NT,VN | UMR DIADE, MIVEGEC | |
| Feb 2021 | IRD Montpellier, France | HPC Introduction | 4 | NT,VN | UMR DIADE, MIVEGEC | |
| Jan 2021 | IRD Montpellier, France | HPC Introduction | 2 | NT | UMR DIADE | |
| Jan 2021 | IRD Montpellier, France | HPC Introduction | 3 | NT,VN | UMR DIADE, MIVEGEC | |
| Jan 2021 | IRD Montpellier, France | HPC Introduction | 6 | NT,VN | UMR DIADE, MIVEGEC | |
| Dec 2020 | IRD Montpellier, France | HPC Introduction | 2 | NT,VN | UMR DIADE, MIVEGEC | |
| Dec 2020 | IRD Montpellier, France | HPC Introduction | 4 | NT,VN | UMR DIADE, MIVEGEC | |
| Nov 2020 | IRD Montpellier, France | HPC Introduction | 2 | NT,VN | UMR DIADE, MIVEGEC | |
| Sept 2020 | IRD Montpellier, France | HPC Introduction | 5 | NT,VN | UMR DIADE, MIVEGEC | |
| July 2020 | IRD Montpellier, France | HPC Introduction | 7 | NT,VN | UMR DIADE, MIVEGEC | |
| June 2020 | IRD Montpellier, France | HPC Introduction | 4 | NT,VN | UMR DIADE, MIVEGEC | |
| May 2020 | IRD Montpellier, France | HPC Introduction | 4 | NT,VN | UMR DIADE, MIVEGEC | |
| May 2020 | IRD Montpellier, France | HPC Introduction | 4 | NT,VN | UMR DIADE, MIVEGEC | |
| April 2020 | IRD Montpellier, France | HPC Introduction | 3 | NT | UMR DIADE | |
| April 2020 | IRD Montpellier, France | HPC Introduction | 1 | NT | UMR DIADE | |
| April 2020 | IRD Montpellier, France | HPC Introduction | 1 | NT | UMR DIADE | |
| March 2020 | IRD Montpellier, France | HPC Introduction | 8 | NT,VN | UMR DIADE,,MIVEGEC | |
| March 2020 | IRD Montpellier, France | HPC Introduction | 3 | NT | UMR DIADE | |
| Feb 2020 | IRD Montpellier, France | HPC Introduction | 9 | NT,VN | UMR DIADE,MIVEGEC | |
| Feb 2020 | IRD Montpellier, France | HPC Introduction | 5 | NT,VN | UMR DIADE,MIVEGEC | |
| Jan 2020 | IRD Montpellier, France | HPC Introduction | 10 | NT,VN | UMR DIADE,MIVEGEC | |
| Jan 2020 | IRD Montpellier, France | HPC Introduction | 17 | NT,VN | UMR DIADE,MIVEGEC | |
| Jan 2020 | IRD Montpellier, France | HPC Introduction | 5 | NT | UMR DIADE | |
| 2019 | IRD Montpellier, France | HPC Introduction | 4 | NT,VN | UMR DIADE,MIVEGEC | |
| 2019 | IRD Montpellier, France | HPC Introduction | 5 | NT,VN | UMR DIADE,MIVEGEC | |
| 2019 | IRD Montpellier, France | HPC Introduction | 1 | NT | UMR DIADE | |
| 2019 | IRD Montpellier, France | HPC Introduction | 1 | NT | UMR DIADE | |
| 2019 | IRD Montpellier, France | HPC Introduction | 4 | NT,VN | UMR DIADE,MIVEGEC | |
| 2019 | IRD Montpellier, France | HPC Introduction | 8 | NT,JO,AC | UMR DIADE,BOREA,IPME | |
| 2019 | IRD Montpellier, France | HPC Introduction | 4 | NT,VN | UMR DIADE,MIVEGEC | |
| 2019 | IRD Montpellier, France | HPC Introduction | 12 | NT,VN,CT | UMR DIADE,MIVEGEC, DIADE | |
| 2019 | IRD Montpellier, France | HPC Introduction | 8 | BT,GD,NT | UMR AGAP,AGAP, DIADE | |
| 2019 | IRD Montpellier, France | HPC Introduction | 7 | NT,VN | UMR DIADE,MIVEGEC | |
| 2019 | IRD Montpellier, France | HPC Introduction | 5 | NT,VN | UMR DIADE, MIVEGEC | |
| 2018 | IRD Montpellier, France | HPC Introduction | 5 | NT,VN | UMR DIADE, MIVEGEC | |
| 2018 | IRD Montpellier, France | HPC Introduction | 3 | NT | UMR DIADE | |
| 2018 | IRD Thiès, Senegal | HPC Introduction | 20 | NT, CT | UMR DIADE, DIADE | |
| 2018 | IRD Montpellier, France | HPC Introduction | 5 | NT | UMR DIADE | |
| 2018 | IRD Montpellier, France | HPC Introduction | 6 | NT | UMR DIADE | |
| 2018 | IRD Montpellier, France | HPC Introduction | 15 | NT, AD, BP | UMR DIADE, IPME, AGAP | |
| 2018 | IRD Montpellier, France | HPC Introduction | 4 | NT | UMR DIADE | |
| 2017 | IRD Montpellier, France | HPC Introduction | 8 | NT | UMR DIADE | |
| 2017 | IRD Montpellier, France | HPC Introduction | 7 | NT | UMR DIADE | |
| 2017 | IRD Montpellier, France | HPC Introduction | 7 | NT | UMR DIADE | |
| 2017 | IRD Dakar, Senegal | HPC Introduction | 15 | NT, SB | UMR DIADE, DIADE | |
| 2016 | IRD Montpellier, France | HPC Introduction | 12 | NT | UMR DIADE | |
| 2015 | IRD Montpellier, France | HPC Introduction | 11 | NT | UMR DIADE | |
| 2014 | IRD Montpellier, France | HPC Introduction | 27 | NT,AD,PL,BG,CT | UMR DIADE, IPME, DIADE, TransVIHMI, DIADE |